Plugins: Difference between revisions

From VASP Wiki
Line 28: Line 28:
An alternative route through entry-points is also possible (see below for further instructions).
An alternative route through entry-points is also possible (see below for further instructions).


The relevant lines of python code to access data from vasp through the any of the interfaces listed above are:
The relevant lines of python code to access data from VASP through the any of the interfaces listed above are:


     def local_potential(constants, additions):
     def local_potential(constants, additions):
Line 41: Line 41:
     def occupancies(constants, additions):
     def occupancies(constants, additions):
         """Defines the PLUGINS/OCCUPANCIES interface"""
         """Defines the PLUGINS/OCCUPANCIES interface"""
Each of the above interfaces may be called by VASP depending on the following {{FILE|INCAR}} tags
    PLUGINS/LOCAL_POTENTIAL = T        ! Modified the local potential every SCF step
    PLUGINS/FORCE_AND_STRESS = T        ! Modifies the force and stress at the end of the SCF loop
    PLUGINS/STRUCTURE = T              ! Modifies the structure at the end of the SCF loop
    PLUGINS/OCCUPANCIES = T            ! Modifies NELECT, EFERMI, SIGMA, ISMEAR, EMIN, EMAX, NUPDOWN at the end of the SCF loop

Revision as of 08:49, 11 June 2024

Implementing features over VASP carries a somewhat significant overhead, both in term of code development and maintenance. An alternative approach is to use our Plugin infrastructure. Simply write Python functions in a pre-defined format and VASP will recognize and execute your code while it is running. This page describes the steps that you will need to write your first Python script and link it with VASP.

Installation

Create a new conda environment.

   conda create -n vasp_plugin python=3.10

Enter the create vasp_plugin conda environment

   conda activate vasp_plugin

Navigate to the plugins directory within VASP source code,

   cd </path/to/vasp/source/code>/src/plugins

Install the VASP Python package through pip

   pip install .

Add the following lines to your makefile.include

   CPP_OPTIONS+= -DPLUGINS
   LLIBS      += $(shell python3-config --ldflags --embed) -lstdc++
   CXX_FLAGS   = -Wall -Wextra  $(shell python3 -m pybind11 --includes) -std=c++11

Compile VASP using the guide to installing VASP.6.X.X

Mind: Make sure to be within the conda environment when you compile VASP.

Run-time instructions

When running VASP with the python interface you will need to add the lib directory of your python to LD_LIBRARY_PATH. You can do this somewhat easily with conda by running python3-config --ldflags, followed by

   export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:<path-from-earlier-command>

Python scripting

Start by creating a file called vasp_plugin.py in the folder in which you are running a VASP calculation. An alternative route through entry-points is also possible (see below for further instructions).

The relevant lines of python code to access data from VASP through the any of the interfaces listed above are:

   def local_potential(constants, additions):
       """Defines the PLUGINS/LOCAL_POTENTIAL interface"""
   def force_and_stress(constants, additions):
       """Defines the PLUGINS/FORCE_AND_STRESS interface"""
   def structure(constants, additions):
       """Defines the PLUGINS/STRUCTURE interface"""
   def occupancies(constants, additions):
       """Defines the PLUGINS/OCCUPANCIES interface"""

Each of the above interfaces may be called by VASP depending on the following INCAR tags

   PLUGINS/LOCAL_POTENTIAL = T         ! Modified the local potential every SCF step
   PLUGINS/FORCE_AND_STRESS = T        ! Modifies the force and stress at the end of the SCF loop
   PLUGINS/STRUCTURE = T               ! Modifies the structure at the end of the SCF loop
   PLUGINS/OCCUPANCIES = T             ! Modifies NELECT, EFERMI, SIGMA, ISMEAR, EMIN, EMAX, NUPDOWN at the end of the SCF loop