NpT ensemble: Difference between revisions
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''' Instructions for setting up a NpT ensemble ''' | ''' Instructions for setting up a NpT ensemble ''' | ||
The | The Parinello-Rahman algorithm is the method of choice when setting up a NpT [[Molecular dynamics calculations|molecular-dynamics]] run. To use the Parinello-Rahman algorithm the [[Langevin thermostat]] has | ||
the {{TAG|ISIF}} tag has to be set to 3. Otherwise the lattice is not allowed to change | to be adjusted for a NpT simulation and the {{TAG|ISIF}} tag has to be set to 3. Otherwise the lattice is not allowed to change during the simulation, preventing VASP from keeping the pressure constant. | ||
during the simulation, preventing VASP from keeping the pressure constant. | |||
Additionally the user can set {{TAG|LANGEVIN_GAMMA}} as when simulating a [[NVT ensemble]], | Additionally the user can set {{TAG|LANGEVIN_GAMMA}} as when simulating a [[NVT ensemble]], | ||
the tag {{TAG|LANGEVIN_GAMMA_L}} which is a friction coefficient for | the tag {{TAG|LANGEVIN_GAMMA_L}} which is a friction coefficient for |
Revision as of 08:14, 11 August 2022
The NpT ensemble (isothermal-isobaric ensemble) is a statistical ensemble that is used to study material properties under the conditions of a constant particle number N, a pressure p fluctuating around an equilibrium value p and a temperature T fluctuating around an equilibrium value T. This page describes how to sample the NpT ensemble from a molecular-dynamics run.
Instructions for setting up a NpT ensemble
The Parinello-Rahman algorithm is the method of choice when setting up a NpT molecular-dynamics run. To use the Parinello-Rahman algorithm the Langevin thermostat has to be adjusted for a NpT simulation and the ISIF tag has to be set to 3. Otherwise the lattice is not allowed to change during the simulation, preventing VASP from keeping the pressure constant. Additionally the user can set LANGEVIN_GAMMA as when simulating a NVT ensemble, the tag LANGEVIN_GAMMA_L which is a friction coefficient for the lattice degrees of freedom and the PMASS tag to assign a fictitious mass to the lattice degrees of freedom.
NpT ensemble | Langevin |
---|---|
MDALGO | 3 |
ISIF | 3 |
additional tags to set | LANGEVIN_GAMMA, LANGEVIN_GAMMA_L, PMASS |
The additional tags in the column for the thermostat don't have to be set necessarily because VASP has a set of default values for these tags. To use the NpT ensemble VASP has to be compiled with the precompiler flag -Dtbdyn. The A general guide for molecular-dynamics simulations can be found on the molecular-dynamics page.
An example INCAR file for the NpT ensemble
#INCAR molecular-dynamics tags NpT ensemble IBRION = 0 # choose molecular-dynamics MDALGO = 3 # using Langevin thermostat ISIF = 3 # compute stress tensor and change box volume/shape TEBEG = 300 # set temperature NSW = 10000 # number of time steps POTIM = 1.0 # time step in femto seconds LANGEVIN_GAMMA = 10.0 10.0 10.0 # Langevin friction coefficient for three atomic species LANGEVIN_GAMMA_L = 10.0 # Langevin friction coefficient for lattice degrees of freedom PMASS = 1000 # the fictitious mass of the lattice degrees of freedom
Mind: This INCAR file only contains the parameters for the molecular-dynamics part. The electronic minimization or the machine learning tags have to be added. |
Related tags and articles
Molecular-dynamics calculations, ISIF, MDALGO, LANGEVIN_GAMMA, LANGEVIN_GAMMA_L, PMASS, Ensembles